PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0024s0676.4.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GATA
Protein Properties Length: 295aa    MW: 33145.3 Da    PI: 8.1043
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0024s0676.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA42.49.5e-14114147135
                 GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                          C++C+tt+ p+WR+ p+g + +C  CGl+ rk+g+
  Kaladp0024s0676.4.p 114 CAHCNTTQAPMWRKTPSGAR-ICDFCGLRLRKRGM 147
                          ********************.***********996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004014.9E-10108157IPR000679Zinc finger, GATA-type
PROSITE profilePS5011415.512108161IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.101.3E-13109158IPR013088Zinc finger, NHR/GATA-type
SuperFamilySSF577163.14E-11110162No hitNo description
CDDcd002021.15E-9113156No hitNo description
PfamPF003202.6E-10114146IPR000679Zinc finger, GATA-type
PROSITE profilePS5152514.379213294IPR027353NET domain
PfamPF170352.9E-15223284IPR027353NET domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MVEVVLATCQ LQHRLRSKGT ASSSQDSASG NNERARSSEK MKRGKFTSPK TSDAPAPVRP  60
PANIESVEEE RSRAVRTGGT TGWTTGELST QGYLERPRKF RSMIDILSQN GQSCAHCNTT  120
QAPMWRKTPS GARICDFCGL RLRKRGMQLS PQKKDQTITG SVQEADNKDE EVTDDLKFLL  180
GNDRLQVEQT MKKYADEISA SLGLLEQQLE GFLDNVTSKC RSMTFFEKQS LWSLIKDLPP  240
ENFDRVVEII KRSRGLDQRD ENDILVDLED TDNAVLWRLY YYAKAVENAR NLVG*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.13e-07GATA transcription factor 15